Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015953421.1_cds_XP_016492579.1_82773
CDS Infomation	[gene=LOC107812060] [db_xref=GeneID:107812060] [protein=RNA polymerase II C-terminal domain phosphatase-like 3] [protein_id=XP_016492579.1] [location=complement(join(24326..24389,24495..24541,24845..25102,25188..25299,25409..25677,25780..25926,26005..26607,26780..28195,28277..28337,28442..28497,28580..28703,28853..29421))] [gbkey=CDS]
Sequence	ATGGAAGAATGTAATACGCCAGCAGTTGGAGATGTAGAGGAGGGTGAGATCTCAGATTCG GCATCGGTTGAAGAAATCAGTGAGGATGCCTTCAATAAGCAACAAGACCCACCTACATCT ACTACTGTTACTACTACTGCTACTACTAAGGTTGTCAATTCGAATAATCAAAATCAAAAT TCGAGTACTAGGGTTTGGACCATGAAAGATATATATAAGTACCCAATCTCGAGGGACTAC GCACGGGGTTTGTATAACCTGGCTTGGGCTCAGGCTGTGCAGAATAAGCCTCTAAACGAA CTCTTCGTCATGACTACTGACGACAACTCCAAGCAGTCTGTGGAATCTTCTTCTGATATG GTGGAAAAGGTCATCATTCATGTGGACGACGATACTATGGAGGAAGGAGAGTTGGAGGAA GGCGAGATCGACTCGGATGCTGATGTCGTTGTGGTAAATGGTGGTGCTACCAATAATGAT GATGAACTTAATTCCTTTAAAACATCAAAGGAGGAGGCAAATTTGATTAGGGAACAACTT CTTAGTGTTACTGTAGACGAAATGGAGAAATCCTTTCCTGTGGTCTGTTCCAAATTGCAA AACTCATTGGACAGCGTGGGGGAACTAGCTGCTTCTCCAGATTCCGACGACCTGGTTCAA CTGTTTATGACTGCAATTCAAATCGTAAATTCTGTTTTCTGCTCCATGAACCAGAATCAG AAGGAACAGAACAGAGAGATTCTATCTAGGTTACTTCTTCATGTAAAGAGCCAAGTACCT GCTCTTTTGTCTTCTGAGCAGTTAAAAGAGGTGGATGCGGTGATTCTCTCTATAAACCAG TCAGCTGTTTCTTCAATTACTGAAGACAATGACCAGGACAATGTGATCAAAGTTGTTAAA GTGTTAGATATGAATGATTCTCATTCATCTTCTGAAAATGCAAATCAGGATTGTACTTCT GTAAAGAAGTGTGATTTAGATGTTGAGTCTACCAAATCTTCAGGTCCTAAGGAGCAGAAT GTGTCATTTGAATATATAAAACCAGGATTAGCCAATTCTAAAGCTAGAGGGTTATCTGTT CCTCTGTTAGACCTCCATAAAGACCACGATATAGATACTCTTCCGTCGCCTACGCGAGAA ATTGCACCAATATTCCCTATTGCAAAAGCATCCACGCAGACACATGGAGTGGTGAAACCG GAGTTGCCCATGTTTACGGGTGCTCTTGAGAAAGGGAGCTCCTTATTGCATCCTTATGAA ACTGATGCCCTTAAAGCTGTTTCCTCCTATCAACAAAAATTTGGTCGAAGTTCCCTTTTT GATAGTGAAAAGTTTCCAAGTCCAACCCCATCCAATGAGGGTGATAGTGGGGAAGGGGAC ACCGGCGGGGAGGTCTCCAGTTCTAATGTTGGACATAATGCCAGCGTTCTGAATGCATCT AGCACTTGGCAACCAATAGTTTCTTCTGTTCCCCCGACAAATATTCTGGCTGGACAAGGG CTTGGAACTGCTCGGAATGCAGATCCTCTTAGTTTTCTGCCAAATCCTTCTTTGCGATCT TCTACTGCAAAAAGTAGAGATCCCAGACTCAGATTGGCAACCAGCGAAGCAGCTGCTCAG AACTTGACTAAGAAGATGTTGCCTATCCCAAACATTGATTTAAAATTAGAGGCTTCTTTA GAGATGATAGGTTCAAGAAAGCAGAAGATAGTAGAGCAACCAGCCTTTGATGCTCCATTG TTGAAGAGACAAAGAAGTGAACAGACTGACTCAATCATTGTGAGTGATGTGCGACCTTCG ACTGGAAATGGTGGTTGGTTAGAGCATAGAGGAACTGTGGGATTGCCAATTACGAGTAGT AACTATGTTACAGATAGCAGTGACAATGACACTAGGAAATTGGAGCAAGTAACAAGTAGT GTCTCTACTAGCAATACTATACCTAGTGTCATAGTTAATGCTGATGTGAACTTGCCATTG ACTGGTACGTCTGCAAATTTGCATTCTCTATTAAAAGACATCGCTATAAATCCTTCAATA TGGATGAATATAATCAAGTTGGAACAGCAGAAGTCTGCAGATGCTTCTAAAACTACCACA GTAGCTTCTAGTTCTAGCTCTATTCTTGGAGCAGTTCCATCAACGAACGTAGCTGCTCCC AAATCTTCTGTGATTGGGCAGAGATCAGTTGGAATAATTCAGACTCCTACACAGACAACA GCAGCAGATGAAGTGGCTAAAGTCCGGATGAAACCTCGCGACCCTCGGCGTGTTCTTCAT AATACTGCAGTTCAAAAGAGTGGGAATTCTGGATCTGCTGATCAATGTAAAACGGGTGTA GCGGGCACACAAGCAATGATAAGCAGTCATTGTGTCCAAAGGCCAGAAGACCAGTTGGAT AGAAAGTCTGCTGTGATACCTTCTACTACACCACCAGACATTGCTCGCCAATTCACCAAA AATTTAAAAAACATTGCTGATATGATCTCTGTTTCACCAACATCCACATCACCATCAGCT GCTTCTCAAACTCCAGCACAACATATGCAAGTTCATCCTAGTAGATTGGAAGGAAATGGG GCAGTTTCTGAGTCAAGTGAACTGCTGACTGATGCTGGCTTAGCTTCTGGAAAAGCTCCT CCTGGTTCATTGCAACTGCAGAGCTCTTGGGGAAATGTTGAGCACCTATTTGAAGGGTAT AGTGACCAGCAGAGAGCTTCTATTCAGAGAGAAAGGACTAGGAGGCTTGAGGAACAGAAG AAAATGTTTTCTGTTCGGAAGCTCTGTCTTGTTTTGGACTTGGACCATACTCTTCTCAAT TCAGCAAAGTTTGTTGAAATCGACCCAGTCCATCAAGAGATATTGAGGAAGAAAGAGGAA CAAGACCGTGAAAAACCTTATAAGCACCTCTTCCGGTTTCCGCACATGGGAATGTGGACA AAATTACGGCCTGGGATCTGGAATTTCTTGGAAAAGGCTAGCAAGCTTTTTGAGCTGCAT CTCTATACCATGGGGAACAAGCTATATGCCACGGAGATGGCAAAATTGCTAGATCCAAAA GGGGATCTGTTTGCTGGACGAGTGATCTCCAGGGGTGACGATGGAGATCCACTTGATGGG GATGAAAGGATTCCTAAGAGTAAGGACTTGGAGGGGGTTTTGGGCATGGAGTCTGCTGTT GTGATTATAGATGATTCTGTGAGAGTCTGGCCACATAACAAGCTAAATTTGATTGTTGTG GAGAGGTATATTTACTTTCCTTGCAGTAGACGACAATTTGGTCTCCCTGGTCCTTCTCTT CTTGAGATTGATCATGATGAAAGACCAGAAGATGGGACATTGGCCTCTTGTTTGGGGGTT ATTCAAAGAATACATCAGAATTTTTTCGAACATCGGTCCATAGATGAAGCTGATGTTAGG AACATCTTAGCCACAGAACAACAGAAGATTCTGGCAGGTTGCCGTATTGTCTTCAGCAGA GTATTTCCTGTTGGTGAAGCCAATCCTCATTTTCATCCTTTGTGGCAGACAGCTGAACAG TTTGGTGCTGTCTGCAGTGGTCAAATTGACGAGCAGGTTACCCATGTGGTTGCCAATTCT CTTGGGACAGACAAGGTTAACTGGGCGCTTTCCACTGGTCGATTTGTTGTTCATCCTGGC TGGGTGGAGGCATCAGCTTTGCTTTATCGGAGGGCGAATGAACATGATTTTGCTATTAAA CCTTAA

Peptide Sequence

PEP ID	XP_016492579.1
PEP Infomation	PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 3 [Nicotiana tabacum]
Sequence	MEECNTPAVGDVEEGEISDSASVEEISEDAFNKQQDPPTSTTVTTTATTKVVNSNNQNQN SSTRVWTMKDIYKYPISRDYARGLYNLAWAQAVQNKPLNELFVMTTDDNSKQSVESSSDM VEKVIIHVDDDTMEEGELEEGEIDSDADVVVVNGGATNNDDELNSFKTSKEEANLIREQL LSVTVDEMEKSFPVVCSKLQNSLDSVGELAASPDSDDLVQLFMTAIQIVNSVFCSMNQNQ KEQNREILSRLLLHVKSQVPALLSSEQLKEVDAVILSINQSAVSSITEDNDQDNVIKVVK VLDMNDSHSSSENANQDCTSVKKCDLDVESTKSSGPKEQNVSFEYIKPGLANSKARGLSV PLLDLHKDHDIDTLPSPTREIAPIFPIAKASTQTHGVVKPELPMFTGALEKGSSLLHPYE TDALKAVSSYQQKFGRSSLFDSEKFPSPTPSNEGDSGEGDTGGEVSSSNVGHNASVLNAS STWQPIVSSVPPTNILAGQGLGTARNADPLSFLPNPSLRSSTAKSRDPRLRLATSEAAAQ NLTKKMLPIPNIDLKLEASLEMIGSRKQKIVEQPAFDAPLLKRQRSEQTDSIIVSDVRPS TGNGGWLEHRGTVGLPITSSNYVTDSSDNDTRKLEQVTSSVSTSNTIPSVIVNADVNLPL TGTSANLHSLLKDIAINPSIWMNIIKLEQQKSADASKTTTVASSSSSILGAVPSTNVAAP KSSVIGQRSVGIIQTPTQTTAADEVAKVRMKPRDPRRVLHNTAVQKSGNSGSADQCKTGV AGTQAMISSHCVQRPEDQLDRKSAVIPSTTPPDIARQFTKNLKNIADMISVSPTSTSPSA ASQTPAQHMQVHPSRLEGNGAVSESSELLTDAGLASGKAPPGSLQLQSSWGNVEHLFEGY SDQQRASIQRERTRRLEEQKKMFSVRKLCLVLDLDHTLLNSAKFVEIDPVHQEILRKKEE QDREKPYKHLFRFPHMGMWTKLRPGIWNFLEKASKLFELHLYTMGNKLYATEMAKLLDPK GDLFAGRVISRGDDGDPLDGDERIPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVV ERYIYFPCSRRQFGLPGPSLLEIDHDERPEDGTLASCLGVIQRIHQNFFEHRSIDEADVR NILATEQQKILAGCRIVFSRVFPVGEANPHFHPLWQTAEQFGAVCSGQIDEQVTHVVANS LGTDKVNWALSTGRFVVHPGWVEASALLYRRANEHDFAIKP

Transcript Sequence

Gene sequence data has not been registered.